http://imagej.273.s1.nabble.com/FITS-Format-Support-tp5011134p5011142.html
certain types of multi-plane FITS files. Perhaps yours are a different type.
You can write to the ome-users list [1] for further assistance. The
> Hi Curtis,
>
> Thanks for the Bio-Formats library recommendation. I was able to install
> it into the ImageJ library, but unfortunately, it does not appear to
> support FITS files that contain multiple images within them.
>
> I have a fits file with 2 HDUs, each describing an image (both 2-D
> images). Not sure if I'm overlooking one of the Bio-Formats settings or
> the menu options available through imageJ.
>
> I see that there are javadocs for this library, so I'll go through this to
> see if there is some sort of browse feature to support my use case.
>
> Thanks,
> Michael
>
>
> On 1/8/15 12:44 PM, "Curtis Rueden" <
[hidden email]> wrote:
>
> >Hi Michael,
> >
> >> I have a FITS file containing 2 images within the file, but ImageJ
> >> looks like it only recognizes the first image. Is there a way to get
> >> to that second image?
> >
> >Did you try using Bio-Formats [1]? It supports multi-plane FITS files
> >(NAXIS3 > 1).
> >
> >> I have been using the ImageJ library
> >
> >Bio-Formats is usable as a standalone Java library [2] and also has an
> >ImageJ-compatible API (e.g., [3]).
> >
> >Regards,
> >Curtis
> >
> >[1]
http://fiji.sc/Bio-Formats> >[2]
> >
http://openmicroscopy.org/info/bio-formats/developers/java-library.html> >[3]
> >
>
https://github.com/openmicroscopy/bioformats/blob/v5.0.6/components/bio-fo> >rmats-plugins/utils/Simple_Read.java
> >
> >On Thu, Jan 8, 2015 at 12:44 PM, Cayanan, Michael D (398G) <
> >
[hidden email]> wrote:
> >
> >> Hi,
> >>
> >> I have been using the ImageJ library to read FITS images and converting
> >> them to jpeg, gif, etc.
> >>
> >> I have a FITS file containing 2 images within the file, but ImageJ looks
> >> like it only recognizes the first image. Is there a way to get to that
> >> second image?
> >>
> >> Thanks in advance for your help,
> >> Michael
> >>
> >> --
> >> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html> >>
> >
> >--
> >ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>
> --
> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>