Login  Register

Re: clojure and fiji

Posted by rabih assaf-2 on Jan 29, 2015; 8:43am
URL: http://imagej.273.s1.nabble.com/clojure-and-fiji-tp5011348p5011361.html

thank you,
do you have an idea how to find the dimensions of an image using clojure?

> Date: Wed, 28 Jan 2015 17:34:09 +0100
> From: [hidden email]
> Subject: Re: clojure and fiji
> To: [hidden email]
>
> Hi,
>
> using the functions built into ImageJ, you can do something like this in
> Clojure:
>
> (def ^:dynamic *imp* (ij.WindowManager/getCurrentImage))
> (.setRoi *imp* 10 10 40 40)
> (ij.IJ/run "Set Measurements..." "standard redirect=None decimal=3")
> (ij.IJ/run *imp* "Measure" "")
>
> Hope that helps
> Jan
>
>
> On 28.01.15 16:29, Albert Cardona wrote:
> > Rabih: all the pieces you need are listed in http://fiji.sc/Clojure_
> > Scripting
> >
> > I know because I wrote them myself.
> >
> > Albert
> >
> > 2015-01-28 10:17 GMT-05:00 rabih assaf <[hidden email]>:
> >
> >> Hello, does anyone know how to calculate variance of a selected area using
> >> clojure?
> >>
> >>> Date: Wed, 28 Jan 2015 14:24:31 +0100
> >>> From: [hidden email]
> >>> Subject: Re: clojure and fiji
> >>> To: [hidden email]
> >>>
> >>> Hi Rabih,
> >>>
> >>> On 28.01.15 14:03, rabih assaf wrote:
> >>>> Is there anyone familiar with using clojure language in imagej?
> >>>>
> >>>
> >>> You can find some clojure scripting examples here:
> >>> http://fiji.sc/Clojure_Scripting
> >>>
> >>> For more specific questions, this list is the best place to ask.
> >>>
> >>> Cheers,
> >>> Jan
> >>>
> >>> --
> >>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> >>
> >> --
> >> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> >>
> >
> >
> >
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
     
--
ImageJ mailing list: http://imagej.nih.gov/ij/list.html