Re: Analyze particles Exclude edge particles not working when automated

Posted by Rasband, Wayne (NIH/NIMH) [E] on Feb 21, 2015; 4:20pm
URL: http://imagej.273.s1.nabble.com/Analyze-particles-Exclude-edge-particles-not-working-when-automated-tp5011662p5011716.html

> On Feb 19, 2015, at 6:08 AM, Mariam Shirdel <[hidden email]> wrote:
>
> It worked! Thank you :)
>
> Is it possible to change the colour of Outlines in Analyze particles to red?

Use the show=[Overlay Outlines] option and you can easy change the outline color and line width. Here is an example:

  run("Blobs (25K)");
  setAutoThreshold("Default");
  run("Analyze Particles...", "  show=[Overlay Outlines] exclude");
  resetThreshold();
  run("Overlay Options...", "stroke=red width=2 apply");
  run("Flatten");

-wayne

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