Still Problems with nd2 Bio Format importer
Posted by
Greg on
Feb 25, 2015; 3:26pm
URL: http://imagej.273.s1.nabble.com/Still-Problems-with-nd2-Bio-Format-importer-tp5011764.html
Hi,
so when trying to import nd2 files I see some strange grey scale image which only poorly resembles the original which is fine as validated by the NIS viewer.
Then according to this thread
http://imagej.1557.x6.nabble.com/Latest-Bio-Formats-in-Fiji-td5009834i20.htmlI followed the (only 3 weeks old!) instructions from
http://trac.openmicroscopy.org/ome/ticket/12548#comment:11Now when I try to import a nd2 file via Plugins -> Bio-Formats I get the following java exception:
(Fiji Is Just) ImageJ 2.0.0-rc-24/1.49m; Java 1.6.0_65 [64-bit]; Mac OS X 10.10.1; 21MB of 20379MB (<1%)
java.lang.NoClassDefFoundError: com/drew/imaging/ImageProcessingException
at loci.formats.in.JPEGReader.<init>(JPEGReader.java:77)
I truncated the output which anyways is not fully shown by Fiji.
I repeated the instructions from the OME bug-tracker with a fresh Fiji installation twice just to make sure I did not miss any files/steps but this problem remains.
Any help appreciated !
Greets,
Greg