Posted by
ctrueden on
Mar 04, 2015; 11:31pm
URL: http://imagej.273.s1.nabble.com/How-to-add-more-than-38-counter-types-in-Cell-Counter-plugin-tp5011798p5011881.html
Hi Pavica,
> I've never done anything in ImageJ that involved more than merely
> pushing the buttons
I suggest giving the Trainable Weka Segmentation a try. It would only take
a few minutes to try it out, and the worst-case scenario is that it can't
handle your data. But it might save you loads of time.
http://imagej.net/Trainable_Weka_SegmentationRegards,
Curtis
On Wed, Mar 4, 2015 at 5:21 PM, Pavica <
[hidden email]> wrote:
> Hi Curtis and Oli,
>
> thank you so much for helping with this. Oliver, thanks for explaining the
> problem of automated counting - I do have a lots of artifacts and things
> like rocks of different sizes, shapes and colors; mounds, pits, holes etc.,
> or only a part of an animal sticking from the mud... I think all this would
> make the automatic counting of animals challenging. And besides all that, I
> am not a programmer, I am a biologist with a very very limited coding
> experience. That being said, I will try to implement your guys' suggestions
> by following your instructions, even though I've never done anything in
> ImageJ that involved more than merely pushing the buttons, so we'll see how
> it goes!
>
> Thank you!
>
> Pavica
>
>
>
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