Re: How to measure nuclear protein spatial distribution

Posted by PEARSON Matthew on Mar 12, 2015; 6:14pm
URL: http://imagej.273.s1.nabble.com/Macro-for-recognize-shapes-tp5011825p5011956.html

Hi Dimiter,

Thanks for the info.  I was asking on behalf of one of our facility users and we came up with a solution in the end using the radial profile feature of imageJ.

Thanks,

Matt


On 12 Mar 2015, at 08:21, Dimiter Prodanov <[hidden email]> wrote:

> Hello,
>
> If your protein is sufficiently sparsely localized you can treat it as a
> point process
> Look for example here:
> http://www.ncbi.nlm.nih.gov/pubmed/17049615
> http://www.ncbi.nlm.nih.gov/pubmed/23785482
>
>
> If the protein is dense you can treat it as a Gaussian random field.
> I'll be happy to answer more questions.
>
> best regards,
>
> D Prodanov
>
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