Re: FW: Directionality plugin - getting Directionality analysis output values

Posted by Jean-Yves Tinevez on Mar 16, 2015; 8:28am
URL: http://imagej.273.s1.nabble.com/FW-Directionality-plugin-getting-Directionality-analysis-output-values-tp5011976p5011979.html

Hi Jaqui, The Python script you point to should do the work. But you don't have to run it after running the plugin. The python script itself runs the plugin. It would be the base on which you could build something that would allow you to process the 2000 images in batch. The 2nd plugin on the wiki page will show you how to get the analysis results. You mention that you get errors. Would you care to copy/paste them here, with a description on how they occur? But first, try to run it as mention above. Best jy