Re: Water-shedding non-circular objects (w/ Attachment)
Posted by
Niko Ehrenfeuchter on
Mar 20, 2015; 8:15am
URL: http://imagej.273.s1.nabble.com/Water-shedding-non-circular-objects-w-Attachment-tp5012071p5012072.html
Dear anonymous,
you could have a look at Jan Brocher's "Irregular Watershed":
http://fiji.sc/BioVoxxel_Toolbox#Watershed_Irregular_StructuresCheers
Niko
On 19.03.2015 22:36, Clay Morton wrote:
> Hey good people, I was wondering if anyone knew of a way to successfully separate touching particles that are not circular is shape. It seems that the water-shedding function only separates touching particles if they are circular, but has difficulty in correctly separating different shapes. Attached is an image that I have been working with. As you can see when a "crescent" shaped cell (sickle cell) is touching a circular cell (flat red blood cell), proper division does not occur. Also elliptical cells are sometimes cut in half (lower middle image).?Any ideas how I could correct this?
>
> Thanks
>
>
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