unable to open lif file
Posted by maimisa on Apr 09, 2015; 9:45pm
URL: http://imagej.273.s1.nabble.com/unable-to-open-lif-file-tp5012426.html
I cannot open some of my lif files and have no idea why that is. One of my
file opened fine but I don't know what was different about that one. Below
is the error message that I got. I've tried to update to the new bioformat
but that makes no difference.
LIFReader initializing C:\Users\maimisa\Desktop\Confocal\15_3_1 confocal
example.lif
Reading header
Finding image offsets
LIFReader initializing C:\Users\maimisa\Desktop\Confocal\15_3_4_A549+CQ.lif
Reading header
Finding image offsets
Exception in thread "DrawAndDrop" java.lang.NumberFormatException: empty
String
at sun.misc.FloatingDecimal.readJavaFormatString(FloatingDecimal.java:992)
at java.lang.Double.valueOf(Double.java:475)
at java.lang.Double.<init>(Double.java:567)
at loci.formats.in.LIFReader.translateFilterSettings(LIFReader.java:1495)
at loci.formats.in.LIFReader.translateMetadata(LIFReader.java:1006)
at loci.formats.in.LIFReader.initMetadata(LIFReader.java:511)
at loci.formats.in.LIFReader.initFile(LIFReader.java:453)
at loci.formats.FormatReader.setId(FormatReader.java:1317)
at loci.formats.ImageReader.setId(ImageReader.java:753)
at io.scif.bf.BioFormatsFormat$Parser.typedParse(BioFormatsFormat.java:424)
at io.scif.bf.BioFormatsFormat$Parser.typedParse(BioFormatsFormat.java:406)
...
I was wondering if anyone else experience this or can help with the issue.
Greatly appreciate any help
mai