Re: Result table in plugin

Posted by Nicolas Brouilly on May 11, 2015; 9:53am
URL: http://imagej.273.s1.nabble.com/Result-table-in-plugin-tp5012789p5012803.html

Hi Olivier,

Thanks for you reply !

That's exactly what I have been doing over the weekend... because, yes,
when you're talking about thousands of tables, it takes days...

So it was good enough as a proof of principle for the rest of my script
but too slow for an actual use.

I just realized that the IJ.deleterows function is recorded when I
remove rows by hand (Selection of 2 rows, Edit/Clear ). However it does
not work when called from a macro. Is this helping you to help me ? How
to make it work via macro ? Is there an "IJ.copyrows"-like function
somewhere ?

Another option would be to modify the plugin so that the results are
added to the conventional Result table instead but I don't know how to
edit a class file. Any hints ?

Thanks again !

Nico

On 11/05/2015 10:20, Burri Olivier wrote:

> Hi Nico,
>
> Indeed, the IJ.renameResults does not seem to like the format.
> So far, a workaround that I found is as follows:
>
> //Select proper window, modify this to whatever you need
> selectWindow("Image correlation. Local region size = 3 pixels");
>
> // Save as result and reopen right away
> saveAs("results", "D:\\temp.csv");
> open("D:\\temp.csv");
>
> You can now access the results...
>
> Best
>
> Oli
> BioImaging & Optics Platform, BIOP
> EPFL - SV - PTECH - BIOP
>
>
>> -----Original Message-----
>> From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of
>> Nicolas Brouilly
>> Sent: Saturday, May 9, 2015 2:38
>> To: [hidden email]
>> Subject: Result table in plugin
>>
>> Dear all,
>>
>> I want to use the Image CorrelationJ plugin within a macro and retrieve some
>> data from the result table at each cycle of a "for" loop. But, nResults gives a
>> value of 0 and getResults("Slope", 1) brings up the following error message:
>> "Results" table empty in line 30
>>
>> The results table popping up is named "Image correlation. local region size = 4
>> pixels"
>>
>> I tried to select the window from the macro, it works. It tried to rename it, it
>> does not.
>>
>> What do I do wrong ?
>>
>> Thank you !
>>
>> Nico
>>
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>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

--

Nicolas BROUILLY, PhD

Zerial lab,

Max Planck Institute of Molecular

Cell Biology and Genetics

Pfotenhauerstr. 108

01307 Dresden

phone: [phone]

e-mail: [hidden email]


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