Posted by
Knecht, David on
Jun 11, 2015; 4:55pm
URL: http://imagej.273.s1.nabble.com/importing-video-in-image-J-tp5013123p5013141.html
I also use Quicktime Pro (version 7 as the later ones don’t have many features). I output tiff sequences from Fiji and then import the image sequence into Quicktime Pro so I can export as a movie using any of the codecs Apple offers. Dave
On Jun 11, 2015, at 12:48 PM, Cammer, Michael <
[hidden email]<mailto:
[hidden email]>> wrote:
As I've posted in the past, we use Quicktime Pro to output the movies to folders of single frame images. The software has options for a few formats and different fame sampling rates. We've used this for many formats including a project where someone used an iPhone to take 10 minute movies of mice in a box.
=========================================================================
Michael Cammer, Microscopy Core & Skirball Institute, NYU Langone Medical Center
Cell: 914-309-3270 ** MY OFFICE HAS MOVED TO SKIRBALL 2nd FLOOR, Back right **
http://ocs.med.nyu.edu/microscopy &
http://microscopynotes.com/-----Original Message-----
From: ImageJ Interest Group [mailto:
[hidden email]] On Behalf Of Jouan Julie
Sent: Thursday, June 11, 2015 10:50 AM
To:
[hidden email]<mailto:
[hidden email]>
Subject: importing video in image J
Hello,
I would like to import a video file in Fiji/imageJ in order to track mice.
I tried different video formats with several converters like :
- .avi : The following message appears : "An error occurred reading the AVI file, unsupported compression : 34363248 'H264' " or even "Not an avi file" with an other converter.
- .mov with QuickTime 7 Pro : I have a frame named "Bioformats import option", and when I click on "Ok", I have the following message "File is not a supported format, a reader plugin is not availaible, or it was not found". And howerver, I have the plugin "QT_Movie_Opener", "QT_Stack_Writer" and "QTVirtualStack".
I also tried the solutions offered in this image J listserv like :
-using FFMPEG (free video conversion software) but I can't load it -trying the FFMPEG plugin but it didn't change anything -using virtualdub and then exporting as a bmp stack then ImageJ/Fiji, but I can't open all the fragmented images in image J, I can only import them one by one
Do you have any solution/suggestions to my problem to import a video in image J/Fiji ?
It would be very helpful,
Thank you,
Julie
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ImageJ mailing list:
http://imagej.nih.gov/ij/list.htmlDr. David Knecht
Professor of Molecular and Cell Biology
Core Microscopy Facility Director
University of Connecticut
91 N. Eagleville Rd.
Storrs, CT 06269
860-486-2200
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