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Re: Reslice (project) at arbitrary angle in a 3D stack

Posted by Michael Schmid on Jun 18, 2015; 12:50pm
URL: http://imagej.273.s1.nabble.com/Reslice-project-at-arbitrary-angle-in-a-3D-stack-tp5013198p5013199.html

On Jun 18, 2015, at 14:27, Christophe Leterrier wrote:

> What is available now in ImageJ/Fiji for maoking projections along an
> arbitrary x,y,z direction in a 3D stack? I found some discussions circa
> 2009 mentioning VisBio from C. Rueden, but I'm wondering if there is
> something more recent and integrated in ImageJ/Fiji (via 3D viewer maybe?)

Hi Christophe,

you can rotate a stack in x/y by Image>Transform>Rotate, then exchange x and z (or y and z) by Image>Stacks>Reslice, and rotate again. This should allow you to have you any arbitrary slice direction. It won't be 3D-interactive however.

Michael

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