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Re: FIJI on Mac OS X

Posted by Jordan T Becker on Jul 04, 2015; 12:14am
URL: http://imagej.273.s1.nabble.com/FIJI-on-Mac-OS-X-tp5013414p5013417.html

Thanks Curtis,

I saw this bug on either this list or the FIJI specific list. Checking the
Mac OS System Preferences > Java Control Panel > Updates, I am up to date
with _45. Although when FIJI opens it indicates that it's using Java
1.8.0_25.

Cheers,
Jordan

Jordan T. Becker
Research Fellow - Sherer Lab
McArdle Cancer Biology Program
University of Wisconsin - Madison
[hidden email]

Less invasions, more equations. - Hubert J. Farnsworth
Whenever we propose a solution to a problem, we ought to try as hard as we
can to overthrow our solution, rather than defend it. - Karl Popper

On Fri, Jul 3, 2015 at 3:59 PM, Curtis Rueden <[hidden email]> wrote:

> Hi Jordan,
>
> > The image opens line by line (slow) and flipping through three
> > channels is also slow.
>
> There was a bug in Java with symptoms like this. Have you upgraded to the
> latest version of Java? (1.8.0_45 as of this writing)
>
> Regards,
> Curtis
>
> On Fri, Jul 3, 2015 at 10:58 AM, Jordan T Becker <[hidden email]>
> wrote:
>
> > Hey,
> >
> > So I'm still have problems using FIJI on Mac OS X. FIJI opens, and will
> > open an image file (.nd2 and .png). The image opens line by line (slow)
> and
> > flipping through three channels is also slow. When I bring up the
> channels
> > tool to colorize the grayscale channels, FIJI just freezes. I click the
> > drop down in the channels tool, its slow to reveal the options, then
> when I
> > click color, FIJI no longer responds.
> >
> > I noticed it a week ago. It doesn't do this with the lifeline version
> from
> > November 2014. I have removed all instances of FIJI and downloaded the
> most
> > recent FIJI with ImageJ2.0.31. I've tried both the "no JRE" and MacOSX
> > versions. I am running Java 8, so perhaps there are still some bugs
> there.
> >
> > I haven't had a hardware problem. With previous FIJI iterations, just a
> > couple months ago I could use FIJI with multi-GB .nd2 files to process,
> > analyze, and make movies. Now it won't even change colors on 10MB files.
> >
> > Anyone else?
> > Jordan
> >
> > Sherer Lab
> > UW-Madison
> >
> > --
> > ImageJ mailing list: http://imagej.nih.gov/ij/list.html
> >
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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