http://imagej.273.s1.nabble.com/Bio-Formats-update-and-nd2-tp5013551p5013557.html
Thanks Mark, that did it. I must have checked that option without
noticing it.
>Hi Tim,
>
>>'Bio-Formats File Stitching'
>
>In the Bio-Formats importer dialog, do you have "Dataset organization -
>Group files with similar names" enabled? This flag is for multi-file
>formats, so if that's not what you want you should be able to simply
>uncheck this option.
>
>If the File Stitching dialog is coming up without this option checked then
>you may want to contact the Bio-Foramts team directly for advice. They
>maintain their own bug tracking system. There are instructions for
>reporting issues here:
>
http://www.openmicroscopy.org/site/support/bio-formats5.1/about/bug-report>ing.html
>
>They are quite responsive and will be able to determine if this is a bug
>or
>deficiency in Bio-Formats, or a problem in the importer configuration.
>
>Best,
>Mark
>
>On Tue, Jul 14, 2015 at 8:20 AM, Feinstein, Timothy N <
[hidden email]>
>wrote:
>
>> Has anyone else noticed a problem with Fiji reading .nd2 files via
>> bio-formats? I had been extremely gratified to find that the plugin
>> recently started correctly interpreting multi-XY .nd2 files, but this
>> morning trying to import .nd2 files leads to a new interface that I have
>> not seen before. It asks me to identify the file name and pattern for
>> 'Bio-Formats File Stitching'. Is this a new feature of Bio-Formats or
>>was
>> that previously done automatically? I am back to using Elements Viewer
>>to
>> make TIFFs to import by hand, which works but takes more time and I lose
>> the metadata.
>>
>> Thanks,
>>
>>
>> Tim
>>
>> Timothy Feinstein, Ph.D.
>> Research Scientist
>> University of Pittsburgh Department of Developmental Biology
>>
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>> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>>
>
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