Re: In need of help with a Fiji segmentation project!
Posted by
Bbnation1234 on
Jul 15, 2015; 2:32pm
URL: http://imagej.273.s1.nabble.com/In-need-of-help-with-a-Fiji-segmentation-project-tp5013556p5013571.html
Hi Curtis!
I currently don't have access to a computer so at the moment I can't send you a quality example like I could otherwise.. But on my phone I tried to show the different regions on a mammogram image.
http://i288.photobucket.com/albums/ll183/Bbnation1234/Mobile%20Uploads/image_zpsvyrhe06v.jpghttp://i288.photobucket.com/albums/ll183/Bbnation1234/Mobile%20Uploads/image_zpsq7fqmbbw.jpgThe first is the original image. In the second image, the background is marked with green, and the pectoral muscle is marked with blue. I basically want both of the colored sections gone so that I am left with just the breast. I was unsuccessful using the segmentation plugin that I previously mentioned because part of the breast tissue is the same shade (? Again I am sorry for any incorrect terminology haha) as the pectoral muscle. So within the breast, there would be a segment that would be marked in the same class as the pectoral muscle, which is obviously a problem because we need to be left with the entire breast material.
I will have access to a better example photo later on, so if what I am posting isn't good enough please let me know and I will send a better one!
Amber