Posted by
Jan Eglinger on
URL: http://imagej.273.s1.nabble.com/CANDLE-J-plugin-released-tp5013748p5013857.html
Dear Kai, dear Haider,
I seemed to get CANDLE-J working in Fiji by doing the following:
- introduced an underscore in the script file name: CANDLE_.py to
make it appear in the Plugins menu
- moved the .dll files from the CANDLE-J folder to ./Fiji.app/lib/
to avoid an UnsatisfiedLinkError thrown by JNA
then it started to run but after a while, Fiji (to be precise, the JVM)
shut down without warning, leaving behind a log file like this:
#
# A fatal error has been detected by the Java Runtime Environment:
#
# EXCEPTION_ACCESS_VIOLATION (0xc0000005) at pc=0x000000006a84374e,
pid=8748, tid=9152
#
# JRE version: Java(TM) SE Runtime Environment (8.0_45-b15) (build
1.8.0_45-b15)
# Java VM: Java HotSpot(TM) 64-Bit Server VM (25.45-b02 mixed mode
windows-amd64 )
# Problematic frame:
# C [NoiseEstimation.dll+0x374e]
#
(I can send the whole log file to interested parties on request)
I tried to run with Java 6 and Java 8, but both Java versions led to
said access violation.
Any hints how to get the plugin running within Fiji are appreciated. It
would be nice to see it on an update site [1] some day, to make it easy
for users to install.
Cheers,
Jan
[1]:
http://fiji.sc/Update_SitesOn 02.08.2015 19:53, Kai Schleicher wrote:
> Hi Haider,
>
> Thanks for this great plugin. Its works fine on imageJ 1.49v Java 1.6.0_24
> [64-bit].
>
> However, it does not work in my version of FIJI (ImageJ 2.0.0-rc-34/1.50a
> with java 1.6.0_26 (64-bit)). I downloaded and extracted the windows.zip
> file from github into the plugins folder of my FIJI and restarted FIJI.
> Unfortunately, CANDLE-J does not show up as a plugin.
>
> Is there something on my side I could do to fix this?
>
> cheers,
> Kai
>
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