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Re: cell lineage software

Posted by Michael Doube-4 on Sep 07, 2015; 2:52pm
URL: http://imagej.273.s1.nabble.com/cell-lineage-software-tp5014257p5014258.html

On 07/09/15 15:08, Jeremy Adler wrote:
> We are looking for software that tracks individual cells in a developing cell culture that includes dividing cells and then allows for measurements to be made from two channels in the nuclei.
> The nuclei are identifiable and will be the basis of the lineage tracing. The tracing needs to produce the location and outline of each nucleus at each timepoint and the outlines used to measure and output the mean intensity from two channels.
>
> Suggestions.

TrackMate may do some of what you need:
http://fiji.sc/TrackMate

(we have used it to track dentine tubules)

Michael



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