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Re: particle aggregate length measurement problem

Posted by jerie on Sep 09, 2015; 4:10pm
URL: http://imagej.273.s1.nabble.com/particle-aggregate-length-measurement-problem-tp5014272p5014289.html

Hi Steve,

IJmacro_itzi_ver0.ijm

seeing the actual image, I thought a different strategy fit better and used the color thresholder HSB. There set the hue to match the brown color of the precipitate, then the particle analyzers bounding rectangle width returns the length of the pecipitate. See linked file.

If you would like to use the batch processor as recommended by Avital, I suggest to remove the 'clear' from the run("Analyze Particles...", command, so that all the results should appear. Just make sure the results table is empty before you run the batch.

Good success with the next steps
Let me know if further help is needed,

cheers, Jens
Jens Rietdorf Visiting Scientist Fundação Oswaldo Cruz - Ministério da Saúde, Centro de Desenvolvimento Tecnológico em Saúde (CDTS), Rio de Janeiro, Brasil.