http://imagej.273.s1.nabble.com/Fiji-won-t-boot-after-update-tp5014333p5014342.html
> I am still stuck. Also, when I try to download a new copy of Fiji, I get this:
> HTTP ERROR 404
>
> Problem accessing /job/Stable-Fiji/lastSuccessfulBuild/artifact/fiji-macosx.dmg. Reason:
>
> Not Found
>
> Dr. David Knecht
> Professor of Molecular and Cell Biology
> Core Microscopy Facility Director
> University of Connecticut
> 91 N. Eagleville Rd.
> Storrs, CT 06269
> 860-486-2200
>
> On Sep 15, 2015, at 4:01 AM, Jan Eglinger <
[hidden email]<mailto:
[hidden email]>> wrote:
>
> Hi all,
>
>>> I also extracted an untouched Fiji zip I had, ran
>>> it, updated it, and got the exact same behavior, so something is
>>> broken in the latest update.
>
> This happens because the updater automatically downloads some core component files (imagej-common.jar and imagej-ops.jar) but quits before showing the dialog allowing to download the newly added imagej-deprecated.jar.
> See
https://github.com/imagej/imagej-ops/issues/201>
> As a workaround, you can run the following command from the command prompt:
> ImageJ-win64.exe --update update jars/imagej-deprecated.jar
>
> This will install the required file. After that, just start ImageJ/Fiji as usual.
>
> Hope that helps.
> Jan
>
>
>
> On 15.09.2015 00:32, Menelaos Symeonides wrote:
> I downloaded a fresh Fiji.64bit zip just now, it launches fine over and
> over and does not report needing any updates. I copied this over my
> existing/"broken" Fiji folder and it now launches fine, but upon update
> it had to remove 4 outdated packages. Works fine now, same exact
> behavior on both computers I mentioned.
>
> On 9/14/2015 6:18 PM, Menelaos Symeonides wrote:
> Same issue here. Two different computers, one Windows 7 x64, one
> Windows 10 x64, just updated Fiji.64bit and after the update I can no
> longer launch it. I also extracted an untouched Fiji zip I had, ran
> it, updated it, and got the exact same behavior, so something is
> broken in the latest update.
>
> I ran it in debug mode and got this:
>
> JRE not found in 'C:\FIJI~1.64B/jre'
> JAVA_HOME contains a JRE: 'C:\FIJI~1.64B/java/win64/jdk1.6.0_24//jre'
> Available RAM: 5995MB, using 3/4 of that: 4497MB
> java -Dpython.cachedir.skip=true -Dplugins.dir=C:\\FIJI~1.64B<smb://FIJI~1.64B>
> -Xmx4497m -Xincgc -XX:PermSize=128m -Dsun.java.command=ImageJ
> -Djava.class.path=C:\\FIJI~1.64B/jars/imagej-launcher-3.1.6.jar<smb://FIJI~1.64B/jars/imagej-launcher-3.1.6.jar>
> -Dimagej.dir=C:\\FIJI~1.64B<smb://FIJI~1.64B> -Dij.dir=C:\\FIJI~1.64B<smb://FIJI~1.64B>
> -Dfiji.dir=C:\\FIJI~1.64B<smb://FIJI~1.64B> -Dfiji.defaultLibPath=bin/server/jvm.dll
> -Dfiji.executable=C:\\Fiji.64bit\\fiji-win64.exe<smb://Fiji.64bit//fiji-win64.exe>
> -Dij.executable=C:\\Fiji.64bit\\fiji-win64.exe<smb://Fiji.64bit//fiji-win64.exe>
> -Djava.library.path=C:\\FIJI~1.64B/lib/win64;C:\\FIJI~1.64B/mm/win64<smb://FIJI~1.64B/lib/win64;C://FIJI~1.64B/mm/win64>
> -Dsun.java2d.noddraw=true -Dij.debug=true -Dscijava.log.level=debug
> net.imagej.launcher.ClassLauncher -classpath
> C:\\FIJI~1.64B/jars/ij-1.50b.jar<smb://FIJI~1.64B/jars/ij-1.50b.jar> fiji.Main -port7
> Using JAVA_HOME C:\FIJI~1.64B/java/win64/jdk1.6.0_24//jre
> Opening Java library
> C:\FIJI~1.64B/java/win64/jdk1.6.0_24//jre/bin/server/jvm.dll
> Adding option: -Djava.home=C:\FIJI~1.64B/java/win64/jdk1.6.0_24/
> Launching main class fiji.Main with parameters [-port7]
> Class loader = sun.misc.Launcher$AppClassLoader@138d107f
> ij1.plugin.dirs: null
> $HOME/.plugins: C:\Users\Mel\.plugins does not exist
> Launching main class net.imagej.Main with parameters [-port7]
> Class loader = sun.misc.Launcher$AppClassLoader@138d107f
> Checking class loader: sun.misc.Launcher$AppClassLoader@138d107f
> Checking URL: file:/C:/Fiji.64bit/jars/imagej-launcher-3.1.6.jar
> Not Eclipse because first entry is:
> file:/C:/Fiji.64bit/jars/imagej-launcher-3.1.6.jar
> [DEBUG] Creating service: org.scijava.event.DefaultEventService
> [DEBUG] Creating service: org.scijava.log.slf4j.SLF4JLogService
> [DEBUG] Created service 'org.scijava.log.slf4j.SLF4JLogService' in 342 ms
> [DEBUG] Creating service: org.scijava.thread.DefaultThreadService
> [DEBUG] Created service 'org.scijava.thread.DefaultThreadService' in 2 ms
> [DEBUG] Created service 'org.scijava.event.DefaultEventService' in 409 ms
> [DEBUG] Creating service: net.imagej.legacy.LegacyConsoleService
> [DEBUG] Creating service: net.imagej.legacy.LegacyService
> Error while executing the main() method of class 'net.imagej.Main':
> java.lang.IllegalArgumentException: Invalid service:
> net.imagej.legacy.LegacyConsoleService
> at
> org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:280)
>
> at
> org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:231)
> at
> org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:194)
> at
> org.scijava.service.ServiceHelper.loadServices(ServiceHelper.java:166)
> at org.scijava.Context.<init>(Context.java:267)
> at org.scijava.Context.<init>(Context.java:224)
> at org.scijava.Context.<init>(Context.java:163)
> at org.scijava.Context.<init>(Context.java:149)
> at net.imagej.ImageJ.<init>(ImageJ.java:79)
> at net.imagej.Main.launch(Main.java:61)
> at net.imagej.Main.main(Main.java:73)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>
> at java.lang.reflect.Method.invoke(Method.java:597)
> at
> net.imagej.launcher.ClassLauncher.launch(ClassLauncher.java:258)
> at net.imagej.launcher.ClassLauncher.run(ClassLauncher.java:184)
> at net.imagej.launcher.ClassLauncher.main(ClassLauncher.java:76)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>
> at java.lang.reflect.Method.invoke(Method.java:597)
> at fiji.Main.main(Main.java:173)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
>
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
>
> at java.lang.reflect.Method.invoke(Method.java:597)
> at
> net.imagej.launcher.ClassLauncher.launch(ClassLauncher.java:258)
> at net.imagej.launcher.ClassLauncher.run(ClassLauncher.java:184)
> at net.imagej.launcher.ClassLauncher.main(ClassLauncher.java:76)
> Caused by: java.lang.IllegalArgumentException: Invalid service:
> net.imagej.legacy.LegacyService
> at
> org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:280)
>
> at
> org.scijava.service.ServiceHelper.loadService(ServiceHelper.java:231)
> at
> org.scijava.service.ServiceHelper.createServiceRecursively(ServiceHelper.java:340)
>
> at
> org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:269)
>
> ... 29 more
> Caused by: java.lang.NoClassDefFoundError:
> Lnet/imagej/threshold/ThresholdService;
> at java.lang.Class.getDeclaredFields0(Native Method)
> at java.lang.Class.privateGetDeclaredFields(Class.java:2291)
> at java.lang.Class.getDeclaredFields(Class.java:1743)
> at
> org.scijava.util.ClassUtils.cacheAnnotatedObjects(ClassUtils.java:507)
> at
> org.scijava.util.ClassUtils.getAnnotatedFields(ClassUtils.java:405)
> at
> org.scijava.util.ClassUtils.getAnnotatedFields(ClassUtils.java:379)
> at
> org.scijava.service.ServiceHelper.createServiceRecursively(ServiceHelper.java:315)
>
> at
> org.scijava.service.ServiceHelper.createExactService(ServiceHelper.java:269)
>
> ... 32 more
> Caused by: java.lang.ClassNotFoundException:
> net.imagej.threshold.ThresholdService
> at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
> at java.security.AccessController.doPrivileged(Native Method)
> at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
> at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
> at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
> at java.lang.ClassLoader.loadClass(ClassLoader.java:248)
> ... 40 more
>
>
>
>
>
> --
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http://imagej.nih.gov/ij/list.html>