Posted by
Thomas Boudier-3 on
Sep 30, 2015; 12:56am
URL: http://imagej.273.s1.nabble.com/Local-Thickness-for-anisotropic-voxels-tp5014494p5014495.html
Dear Ofra,
I do not think there is a plugin for local thickness for anisotropic
voxels. I can suggest you to have a look to 3D distance map that may
give you the information you want, or simply make your image anisotropic :
getVoxelSize(width, height, depth, unit);
run("Reslice [/]...", "output=&width start=Top");
run("Reslice [/]...", "output=&width start=Top");
Best,
Thomas
On 30/09/2015 06:44, Ofra Golani wrote:
> Hi,
>
> Does the Local Thickness plugin assume isotropic voxels (voxel size is equal in all directions) ?
> Is there any plugin available for calculating 3D local thickness for anisotropic voxels ?
>
> Thanks
>
> Ofra
>
>
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> Thomas Boudier, Associate Professor, UPMC,
> Université Pierre et Marie Curie, Paris, France.
> BioInformatics Institute (BII)/IPAL, Singapore.
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