Re: Yarns segmentation

Posted by Ignacio Arganda-Carreras-2 on Oct 07, 2015; 3:23pm
URL: http://imagej.273.s1.nabble.com/Yarns-segmentation-tp5014571p5014572.html

Hello Zag,

You can give a try to the Trainable Weka Segmentation
<http://fiji.sc/Trainable_Weka_Segmentation>.

I converted your images to 8-bit and this is what I got using that plugin:

[image: Inline image 1]

These are my settings:

[image: Inline image 2]

I can send you the classifier I got if you want.

Cheers!

ignacio


On Wed, Oct 7, 2015 at 2:06 PM, gvozdin <[hidden email]> wrote:

> Hi all!
>
> I have a stack of images of textile composite from X-Ray mCT (about 1500
> images, TIFF, 16bit). In this stack there are warp and weft yarns (you can
> see an exapmple in images below). So i need to separate warp yarns to one
> stack and weft yarns to the other for the further processing.
> Have anyone an idea how to do that?
> <http://imagej.1557.x6.nabble.com/file/n5014571/Subvolume0490.png>
> <http://imagej.1557.x6.nabble.com/file/n5014571/Subvolume0509.png>
>
>
>
> --
> View this message in context:
> http://imagej.1557.x6.nabble.com/Yarns-segmentation-tp5014571.html
> Sent from the ImageJ mailing list archive at Nabble.com.
>
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> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

--
Ignacio Arganda-Carreras, Ph.D.
Ikerbasque Research Fellow
Departamento de Ciencias de la Computacion e Inteligencia Artificial
Facultad de Informatica, Universidad del Pais Vasco
Paseo de Manuel Lardizabal, 1
20018 Donostia-San Sebastian
Guipuzcoa, Spain

Phone : [phone]
Website: http://sites.google.com/site/iargandacarreras/
<http://biocomp.cnb.csic.es/~iarganda/index_EN.html>

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