ROI manager, multi measure: ROIs in different Z not considered

Posted by Adrain B on Oct 23, 2015; 9:44am
URL: http://imagej.273.s1.nabble.com/ROI-manager-multi-measure-ROIs-in-different-Z-not-considered-tp5014735.html

Hello,

I think there is a bug - or it´s just not made for that - in the "multi measure" function included in the ROI manager (FIJI/ImageJ V1.49S) or I´m doing anything wrong. Maybe someone has a solution o can confirm the bug.

I have images with several z layers (and several channels). ROIs are drawn in different z and going through them in the ROI manager it jumps to the proper z. Also in the properties of the ROIs it seems to be correct (e.g. ROI1 4,3,1 = channel 4, Z 3, 1 I don´t know; ROI2 4,4,1).

I want to measure all the ROIs in their z but when doing "multi measure" in the ROI manager it measures all of them in the same z.

Any idea why or is it just not thought to consider the different z position of the ROIs in the "multiple measure" function of the ROI manager?

Meanwhile I will write a macro to measure "manually" ROI by ROI which takes in account the different z.

Thank you!