Re: Problems with Fiji after Fiji update

Posted by ctrueden on Dec 02, 2015; 8:29pm
URL: http://imagej.273.s1.nabble.com/Problems-with-Fiji-after-Fiji-update-tp5015097p5015102.html

Hi Avital,

> The debugger gives the following error message: (even though the
> import exits, highlighted blue) Can't find method
> ij.measure.ResultsTable.show()

I am surprised that your script ever worked, because the ResultsTable class
does not have a show() method (with no arguments).

At first I thought maybe an older version of ImageJ 1.x had one, but I
checked back through ImageJ 1.48p AFAICT there was never a show() method.

There is a show(String) method, so you could try writing:

  rt.show("Results");

Regards,
Curtis



On Wed, Dec 2, 2015 at 2:07 PM, Avital Steinberg <[hidden email]>
wrote:

> Hi,
> Ever since I updated Fiji, I'm having trouble using it. I uninstalled it
> and reinstalled it, and uninstalled Java 7. I'm using mac 10.9.5, with
> ImageJ version 2.0.0-rc-43/1.50e, build: 49b667f9aa.
>
> It's running with Java 1.6.0_65 [64 bit].
>
> Various scripts that used to work no longer work with this version of Fiji.
> Here's an example:
>
> importClass(Packages.ij.IJ);
> importClass(Packages.ij.plugin.frame.RoiManager);
> importClass(Packages.ij.io.OpenDialog);
> importClass(Packages.ij.io.DirectoryChooser);
> importClass(Packages.java.io.File);
> importClass(Packages.ij.gui.GenericDialog);
> importClass(Packages.ij.util.Tools);
> importClass(Packages.ij.plugin.Duplicator);
> importClass(Packages.ij.measure.ResultsTable);
> importClass(Packages.ij.ImagePlus);
> importClass(Packages.ij.process.ImageProcessor);
> importClass(Packages.ij.util.ArrayUtil);
> importClass(Packages.ij.gui.Overlay);
> importClass(Packages.ij.plugin.filter.ParticleAnalyzer);
> importClass(Packages.ij.gui.Roi);
> importClass(Packages.ij.plugin.RGBStackMerge);
> importClass(Packages.ij.process.ImageConverter);
> importPackage(java.awt);
>
> dir = "/Users/avitalsteinberg/Javascript /RFP wontRun input/";
>
> dirOutput = dir.substring(0, dir.length - 1)+ "_output/";
>
> if(!File(dirOutput).exists()){
>     File(dirOutput).mkdir();
> }
>
> IJ = IJ();
> rm = RoiManager(); // initiating the ROI manager in hidden mode.
> if (rm==null)
>      IJ.error("ROI Manager is not found");
> rt = ResultsTable(); // Here, the default is hidden mode.
> rt.setValue("yCentroid", 0, 1);
> rt.show();
>
> The debugger gives the following error message: (even though the import
> exits, highlighted blue)
> Can't find method ij.measure.ResultsTable.show()
>
> Any idea what can be done to get Fiji to work well with my computer?
>
> Thanks,
> Avital
>
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> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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