NDPI BioFormats Error

Posted by nellypledge on Dec 18, 2015; 3:23pm
URL: http://imagej.273.s1.nabble.com/NDPI-BioFormats-Error-tp5015254.html

Hi guys, I hope all goes well.

Can I please ask if anybody is having troubles with their NDPI files when using the BioFormats plugin.  I get the option to select one of the images from the different sizes, and then after it takes while to scratch at the disk and grab a load of memory it gives the below error.

Any thoughts would be appreciated.
Thanks
Neil


(Fiji Is Just) ImageJ 2.0.0-rc-43/1.50e; Java 1.6.0_24 [64-bit]; Windows 7 6.1; 2666MB of 6095MB (43%)
 
java.lang.ArrayIndexOutOfBoundsException
        at java.lang.System.arraycopy(Native Method)
        at loci.formats.ChannelSeparator.openBytes(ChannelSeparator.java:213)
        at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:349)
        at loci.formats.DimensionSwapper.openBytes(DimensionSwapper.java:249)
        at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:349)
        at loci.formats.MinMaxCalculator.openBytes(MinMaxCalculator.java:269)
        at loci.formats.MinMaxCalculator.openBytes(MinMaxCalculator.java:260)
        at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:335)
        at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:335)
        at loci.plugins.util.ImageProcessorReader.openProcessors(ImageProcessorReader.java:186)
        at loci.plugins.in.ImagePlusReader.readProcessors(ImagePlusReader.java:416)
        at loci.plugins.in.ImagePlusReader.readPlanes(ImagePlusReader.java:380)
        at loci.plugins.in.ImagePlusReader.readImage(ImagePlusReader.java:277)
        at loci.plugins.in.ImagePlusReader.readImages(ImagePlusReader.java:238)
        at loci.plugins.in.ImagePlusReader.readImages(ImagePlusReader.java:216)
        at loci.plugins.in.ImagePlusReader.openImagePlus(ImagePlusReader.java:111)
        at loci.plugins.in.Importer.readPixels(Importer.java:149)
        at loci.plugins.in.Importer.run(Importer.java:86)
        at loci.plugins.LociImporter.run(LociImporter.java:78)
        at ij.IJ.runUserPlugIn(IJ.java:212)
        at ij.IJ.runPlugIn(IJ.java:176)
        at ij.Executer.runCommand(Executer.java:136)
        at ij.Executer.run(Executer.java:65)
        at java.lang.Thread.run(Thread.java:662)