Unwarp edge of neural tissue stack.

Posted by Ethan Cohen on Jan 21, 2016; 8:17pm
URL: http://imagej.273.s1.nabble.com/Unwarp-edge-of-neural-tissue-stack-tp5015426.html

I have a z-stack of 2-D confocal images of neural tissue where the surface is slightly warped.

Is there some way to create a virtual rubber sheet of the surface, where a lattice of surface points are notated (zsection, x, y), and then transform the whole z-stack to align the surface flat?

Ethan.

Ethan Cohen, Ph.D.
Div of Biomedical Physics, WO62 Rm 1204
Office of Science and Engineering Labs,
FDA Center for Devices and Radiological Health
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