how to run the same macro to a set of ROIs on 1 image ?
Posted by Vero on Jan 28, 2016; 11:58am
URL: http://imagej.273.s1.nabble.com/how-to-run-the-same-macro-to-a-set-of-ROIs-on-1-image-tp5015474.html
Hello everybody,
I have to analyze mean gray values (min and max too) for about 50 nuclei, on each image of my study (80 images).
I found a method to determine automatically ROI for each nucleus (by tresholding and analyzing particles with adding to Manager). But before analyzing mean gray values, the ROI has to be transformed to a band with the function Edit / Selection / Make band (automatized in a macro).
Could someone, please, give me a solution to run the macro on all ROIs of a set ? Actually, the ROIs in the Manager are not consider as selections...
Thanks in advance,
Vero
URL: http://imagej.273.s1.nabble.com/how-to-run-the-same-macro-to-a-set-of-ROIs-on-1-image-tp5015474.html
Hello everybody,
I have to analyze mean gray values (min and max too) for about 50 nuclei, on each image of my study (80 images).
I found a method to determine automatically ROI for each nucleus (by tresholding and analyzing particles with adding to Manager). But before analyzing mean gray values, the ROI has to be transformed to a band with the function Edit / Selection / Make band (automatized in a macro).
Could someone, please, give me a solution to run the macro on all ROIs of a set ? Actually, the ROIs in the Manager are not consider as selections...
Thanks in advance,
Vero
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