Posted by
Christian Goosmann-2 on
Feb 05, 2016; 11:59am
URL: http://imagej.273.s1.nabble.com/Figure-J-broken-tp5015547.html
Dear List
FigureJ seems to be broken. When trying to send an image to a panel, it
throws an exception with the message:
Exception in thread "AWT-EventQueue-0" java.lang.NoSuchMethodError:
imagescience.transform.Affine.run(Limagescience/image/Image;Limagescience/transform/Transform;IZZ)Limagescience/image/Image;
at utilities.MyImageMath.getPixels(MyImageMath.java:53)
at FigureJ_Tool.transferROIDataToPanel(FigureJ_Tool.java:451)
at FigureJ_Tool.cleanGUIandTransferROI(FigureJ_Tool.java:1984)
at
FigureJ_Tool$FigureControlPanel$22.actionPerformed(FigureJ_Tool.java:1195)
at
javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995)
at
javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318)
at
javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387)
at
javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242)
at
javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:236)
at
java.awt.AWTEventMulticaster.mouseReleased(AWTEventMulticaster.java:272)
at java.awt.Component.processMouseEvent(Component.java:6289)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3267)
at java.awt.Component.processEvent(Component.java:6054)
at java.awt.Container.processEvent(Container.java:2041)
at java.awt.Component.dispatchEventImpl(Component.java:4652)
at java.awt.Container.dispatchEventImpl(Container.java:2099)
at java.awt.Component.dispatchEvent(Component.java:4482)
at
java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4577)
at
java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168)
at java.awt.Container.dispatchEventImpl(Container.java:2085)
at java.awt.Window.dispatchEventImpl(Window.java:2478)
at java.awt.Component.dispatchEvent(Component.java:4482)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:644)
at java.awt.EventQueue.access$000(EventQueue.java:85)
at java.awt.EventQueue$1.run(EventQueue.java:603)
at java.awt.EventQueue$1.run(EventQueue.java:601)
at java.security.AccessController.doPrivileged(Native Method)
at
java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
at
java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:98)
at java.awt.EventQueue$2.run(EventQueue.java:617)
at java.awt.EventQueue$2.run(EventQueue.java:615)
at java.security.AccessController.doPrivileged(Native Method)
at
java.security.AccessControlContext$1.doIntersectionPrivilege(AccessControlContext.java:87)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:614)
at
java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269)
at
java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184)
at
java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174)
at
java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169)
at
java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)
Then it behaves like described in Alessandros message from October 2013
on this list:
>"...the selection is not inserted. On the main ImageJ panel there is an
>indication "Scaling Image" with three asterisks moving left-right and I'm
>assuming that the software is trying to scale the image in order to fit it
>into the frame but even after one hour, nothing happens."
I am using an up to date FIJI on Win7-32, no difference on another
machine with the 64 bit version. Only an older Version of FIJI last
updated March 2014 still has FigureJ working. I tried manually adding
imagescience.jar to the plugins folder (as suggested by Jerome in reply
to Alessandro in 2013) but no difference.
Any hints?
Christian
--
---
Christian Goosmann
Mikroskopie
Max-Planck-Institut für Infektionsbiologie
Campus Charité Mitte
Charitéplatz 1
10117 Berlin
Tel.: +49 30 28460 388
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