Posted by
ctrueden on
Apr 12, 2016; 5:17pm
URL: http://imagej.273.s1.nabble.com/oib-to-DICOM-tp5016100p5016109.html
Hi Eden,
> I need to convert a .oib (off of an Olympus Fluoview) z-stack into a
> DICOM file for analysis.
You can read OIB files using the Bio-Formats Importer plugin:
http://imagej.net/Bio-FormatsYou can save to DICOM using the Tudor DICOM tools. See:
http://imagej.net/DICOM#How_to_save_DICOM_files_from_ImageJ.3FThe easiest way to get Bio-Formats is to use the Fiji distribution of
ImageJ:
http://fiji.sc/But you will need to install the Tudor DICOM tools manually.
Alternately, you could save to one of the supported open formats such as
TIFF.
Regards,
Curtis
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Curtis Rueden
LOCI software architect -
http://loci.wisc.edu/softwareImageJ2 lead, Fiji maintainer -
http://imagej.net/User:RuedenDid you know ImageJ has a forum?
http://forum.imagej.net/On Mon, Apr 11, 2016 at 4:32 PM, edenm <
[hidden email]> wrote:
> Hi all,
>
> I need to convert a .oib (off of an Olympus Fluoview) z-stack into a DICOM
> file for analysis. If that is not possible, I need it in another file
> format
> besides .oib so that a collaborator of mine (who usually works with DICOM
> but is not familiar with .oib) can analyze the pixel data. He didn't
> specify
> a particular file format, so I imagine there are a number of formats that
> might work for what he needs?
>
> Thanks in advance for your help!
>
>
>
> --
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