Re: Batch converting Simple Neurite Tracer files to images

Posted by Straub, Volko A. (Dr.) on Apr 29, 2016; 5:25am
URL: http://imagej.273.s1.nabble.com/Batch-converting-Simple-Neurite-Tracer-files-to-images-tp5016271p5016277.html

On 29/04/2016 04:46, Tiago Ferreira wrote:

> Dear Volko,
>
> On Apr 28, 2016, at 15:40, Volko Straub <[hidden email]> wrote:
>> I was just wondering whether anybody knows a convenient way to do this automatically for a whole folder of trace files rather than having to manually load each trace file and create the image.
>
> The Neuroanatomy update site[1] implements the "File>Import>Tracings (SWC/Traces)..." command that is macro recordable and should do just that.
>
> NB: Some of the options in the "Render as" drop down menu, may not work as they require SNT v3.0.3, yet to be released.
>      However, "Untagged skeleton" (equivalent to 'Make Line Stack' in SNT's UI), should work without issues.
>
> [1] http://imagej.net/User:Neuroanatomy
>
> -tiago

Thanks Tiago,
This is exactly what I was looking for.
I'm intrigued to hear about an updated version of SNT. Any idea when
this will be released and what new/additional features it will include?
Volko

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