Re: Merge Multiple Images & Cut Through all of Them

Posted by Marina on Jun 14, 2016; 4:02pm
URL: http://imagej.273.s1.nabble.com/Merge-Multiple-Images-Cut-Through-all-of-Them-tp5016617p5016639.html

Hi all,

The best method I have developed thus far is to work on the stack (as I previously mentioned) but I have now created a macro with an assigned keyboard shortcut for the Edit > Clear component (this avoids the "are you sure?" window so is just one button).

This solution works for me as it allows me to quickly cut out sections from all the channels in the same place (I have many cuts to do per image and many images), and then allows me to re-split the channels to the four (not cut) images and analyse them.

However I am still unsatisfied by the inability to split a merged image with more than three channels and by my composite also only having three channels despite me selecting four.
Does anyone have any solutions or insight for this?

Best wishes,

Marina

Marina wrote

The solution I have come up with it to form a stack with my images instead of merging and then use the lasso and Edit > Clear to delete the selection in every channel, however this comes up with an "are you sure?" dialogue box and is tedious as I have many cuts and many images to process.