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Re: jai_imageio in scifio and dcm4chee - conflict

Posted by ctrueden on Jun 16, 2016; 8:38pm
URL: http://imagej.273.s1.nabble.com/jai-imageio-in-scifio-and-dcm4chee-conflict-tp5016519p5016677.html

See also this thread on the ImageJ forum:
http://forum.imagej.net/t/1936


On Thu, Jun 16, 2016 at 1:32 PM, Curtis Rueden <[hidden email]> wrote:

> Hi Ilan,
>
> > I am trying to run dcm4chee inside Fiji and have run into a conflict
> > with scifio.
>
> I doubt this is a problem with SCIFIO. The scifio-jai-imageio-1.1.0.jar is
> a _shadowed_ version of the JAI ImageIO library, and thus will not conflict
> with the regular version.
>
> > moving the code to Fiji gave me a conflict.
>
> Please post the specific error message.
>
> > dcm4chee uses  jai_imageio-1.2-pre-dr-b04 which is larger than the
> > scifio version, 1.1MB compared to 1.0MB.
>
> Like I said, these two JAR files should not conflict, and their relative
> sizes do not matter in any case. What matters is the Java classes inside
> each.
>
> This is a very technical issue, so if you need further assistance, please
> post on the ImageJ Forum (http://forum.imagej.net/) in the Development
> category.
>
> Regards,
> Curtis
>
> --
> Curtis Rueden
> LOCI software architect - http://loci.wisc.edu/software
> ImageJ2 lead, Fiji maintainer - http://imagej.net/User:Rueden
> Did you know ImageJ has a forum? http://forum.imagej.net/
>
>
> On Wed, May 25, 2016 at 5:48 AM, Ilan <[hidden email]> wrote:
>
>> I am trying to run dcm4chee inside Fiji and have run into a conflict with
>> scifio. I succeeded to run dcm4chee inside ImageJ with no scifio, and
>> moving
>> the code to Fiji gave me a conflict.
>> The problem is jai_imageio which claims to be version 5.1, but is probably
>> version 1.1 which is well known.
>> dcm4chee uses  jai_imageio-1.2-pre-dr-b04 which is larger than the scifio
>> version, 1.1MB compared to 1.0MB.
>>
>> I tried using the scifio 5.1 version, but it failed, most likely because
>> it
>> is missing the extra 0.1MB of code.
>> Would it be possible to test if scifio works using the dcm4chee expanded
>> version of jai_imageio?
>> That would allow both dcm4chee and scifio to run together.
>>
>> Thanks,
>> Ilan
>>
>>
>>
>>
>> --
>> View this message in context:
>> http://imagej.1557.x6.nabble.com/jai-imageio-in-scifio-and-dcm4chee-conflict-tp5016519.html
>> Sent from the ImageJ mailing list archive at Nabble.com.
>>
>> --
>> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>>
>
>

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