Macro without windows?

Posted by Jennifer Cass on Jul 09, 2016; 10:10pm
URL: http://imagej.273.s1.nabble.com/Macro-without-windows-tp5016836.html

hi everyone
We're having trouble with a macro that we created to analyze and give us histograms of each of the following red dots


The scripts runs fine in MSWindows and Linux but in order to have it run in a headless environment or in a Raspberry Pi (we got close) it runs into the issue that it can't deal with the different windows. Essentially ImageJ can't address Windows in certain Linux or headless environments it seems.

So my question is: Is there an way to convert this into something else, a plugin perhaps and AVOID opening ImageJ windows to create our processing?  

Would you recommend trying to convert this into something else like Matlab? Would there be an ImageJ->Matlab converter?

Thanks
Jenn