Re: Macro without windows?

Posted by ctrueden on Jul 10, 2016; 2:36pm
URL: http://imagej.273.s1.nabble.com/Macro-without-windows-tp5016836p5016841.html

Hi Jennifer,

If you truly need to run headless (i.e.: on a computer with no display),
then you will need ImageJ2, since plain ImageJ 1.x cannot be used headless
(at least: not without xvfb).

For further details, see:
http://imagej.net/Headless

Regards,
Curtis

--
Curtis Rueden
LOCI software architect - http://loci.wisc.edu/software
ImageJ2 lead, Fiji maintainer - http://imagej.net/User:Rueden
Did you know ImageJ has a forum? http://forum.imagej.net/


On Sat, Jul 9, 2016 at 5:10 PM, Jennifer Cass <[hidden email]> wrote:

> hi everyone
> We're having trouble with a macro that we created to analyze and give us
> histograms of each of the following red dots
> <
> http://imagej.1557.x6.nabble.com/file/n5016836/Screenshot_2016-07-09_18.png
> >
>
> The scripts runs fine in MSWindows and Linux but in order to have it run in
> a headless environment or in a Raspberry Pi (we got close) it runs into the
> issue that it can't deal with the different windows. Essentially ImageJ
> can't address Windows in certain Linux or headless environments it seems.
>
> So my question is: Is there an way to convert this into something else, a
> plugin perhaps and AVOID opening ImageJ windows to create our processing?
>
> Would you recommend trying to convert this into something else like Matlab?
> Would there be an ImageJ->Matlab converter?
>
> Thanks
> Jenn
>
>
>
>
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>
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