http://imagej.273.s1.nabble.com/questions-about-grid-stitching-tp5016991p5016999.html
Perfect. Thank you for pointing this out.
> > something strange. It puts all of my grid of tiles in on row.
> Sounds like a bug. You can file an issue here:
No problem. Your efforts are greatly appreciated.
> Regards,
> Curtis
>
> --
> Curtis Rueden
> LOCI software architect -
http://loci.wisc.edu/software> ImageJ2 lead, Fiji maintainer -
http://imagej.net/User:Rueden> Did you know ImageJ has a forum?
http://forum.imagej.net/>
>
> On Wed, Aug 10, 2016 at 1:54 PM, Aryeh Weiss <
[hidden email]
> <mailto:
[hidden email]>> wrote:
>
> I have two questions about this plugin:
>
> First - I have a set of XYZ stacks that I am stitching.
>
> I would like the stitching to be done only in the xy directions,
> but not in Z. That is, even if the stitcher thinks that a stack
> should be shifted in Z, I do not want that to happen. I though
> that selecting the "Ignore Z- stage position" would do this, but
> it turns out that even with that option stacks are shifted in the
> Z direction.
>
> Is there a way to prevent this. I have the ROIs in the ROI
> manager, but I do not want to write my own fusion program to fuse
> the stacks.
>
> Second - when I select "downsample tiles", the stitching does
> something strange. It puts all of my grid of tiles in on row. When
> I do nto down-sample, with all else the same, it works as
> expected. Do I misunderstand what the downsample option does? I
> was trying ot use it to same space on a really large stitched image.
>
> Tnx in advance for your help,
>
> --aryeh
>
> --
> Aryeh Weiss
> Faculty of Engineering
> Bar Ilan University
> Ramat Gan 52900 Israel
>
> Ph: 972-3-5317638
> FAX: 972-3-7384051
>
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>
>