Re: Separate ROI in each stack slice

Posted by ctrueden on Aug 17, 2016; 5:48pm
URL: http://imagej.273.s1.nabble.com/Separate-ROI-in-each-stack-slice-tp5017040p5017042.html

Hi Madhoosudan,

To work with multiple ROIs, including slice-specific ROIs, use the ROI
Manager. Press the T key to add your current selection. Then draw
additional selections, pressing T each time.

See:
* https://imagej.net/docs/guide/146-30.html#sub:ROI-Manager...
* http://imagej.github.io/presentations/fiji-segmentation/#/
* http://imagej.net/Segmentation

Regards,
Curtis

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Curtis Rueden
LOCI software architect - http://loci.wisc.edu/software
ImageJ2 lead, Fiji maintainer - http://imagej.net/User:Rueden
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On Wed, Aug 17, 2016 at 11:53 AM, madhoosudan patil <
[hidden email]> wrote:

> Hellow,
> I want to define separate ROI for each individual slice in the imported
> image stack of around 31 images. I could do it once but again I am not sure
> I am not able to select the separate ROI for each image. Whenever I draw
> ROI for one image it by default gets applied to all the images and clicking
> on any image outside the ROI will remove ROI from all images. Could anyone
> help me in this regards.
>
> Thanks.
>
>
> ​
> ​Regards,
>
>
> ​Madhoosudan Patil,
> Post Doctoral Fellow,
> ​Skaggs School of Pharmacy,​
>
> ​Anschutz Medical Campus,​
> ​University of Colorado, Denver, USA.
> ​Ph.: 001 [phone]
> E-Mail: [hidden email]
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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