Re: apparent bug in Fiji+ClearVolume

Posted by ctrueden on Aug 18, 2016; 8:36pm
URL: http://imagej.273.s1.nabble.com/apparent-bug-in-Fiji-ClearVolume-tp5017049p5017076.html

Thanks Aryeh, I opened an issue in the relevant GitHub repository:

https://github.com/ClearVolume/imglib2-clearvolume/issues/7

Hopefully Florian or another one of the ClearVolume developers will have
time to take a look.

Regards,
Curtis

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Curtis Rueden
LOCI software architect - http://loci.wisc.edu/software
ImageJ2 lead, Fiji maintainer - http://imagej.net/User:Rueden
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On Thu, Aug 18, 2016 at 1:40 AM, Aryeh Weiss <[hidden email]> wrote:

> After running ClearVolume, subsequent menu panels (eg, reslice, adjust
> contrast/brightness), open with transparent backgrounds. A creenshot
> showing what I mean is available at the following link:
>
> https://drive.google.com/file/d/0Bytu294eIohjd1hTNjVZZjVzeHM/
> view?usp=sharing
>
> This happens on a Windows 7-64bit system, running Java 1.8.0_102 (latest
> java), It also happens with the java 8 that comes with Fiji (1.8.0_66). It
> does not happen on my macbook (OSX10.11) system.
>
> Aside, I also found both WIndows and OSX that I could not export
> ClearVolume rendered volumes to Fiji, I could not get a console or control
> panel with "C", and could not get a display of the values selected by the
> sliders (like gamma, min, max, etc). Has anyone succeeded in getting these
> functionalities to work?
>
> I was unable to use the Fiji bug reporting system, so I am posting it here.
>
> --aryeh
> Faculty of Engineering
> Bar Ilan University
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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