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Problems reading JPG files

Posted by Paul Stutzman-2 on Aug 29, 2016; 7:38pm
URL: http://imagej.273.s1.nabble.com/Problems-reading-JPG-files-tp5017133.html

Something appears to have changed in the way ImageJ (v 1.50i) is interpreting 8-bit .JPG files that I have been successfully processing in the past. Previously these files would be displayed and processed as 8-bit, single plane images but now with images from my same SEM imaging system (which has not been updated), I get what appears to be a three-plane RGB image, even though the image type is identified as 8-bit via Image->Type. The white strip at the image top notes 1/3  and the bottom strip has a scoll slider as the RGB images do and the colors show in the B&C window as I slide the scroll bar.  If I attempt to adjust the brightness/contrast I get whatever color it is set to using the slider and adjusting brightness/contrast is difficult, if not impossible to retain a gray color scheme.  Attempts to do RGB color merges of X-ray images is similarly useless now.  Can anyone explain the change and how I might be able to read these as 8-bit, single plane images and eliminate the RGB interpretation?  I am not seeing any thing under Options.

Show Info appears to confirm this, and GIMP identifies it as RGB color, 1 layer

SCIFIO version: 0.27.1
File format: JPEG
--- Dataset Information ---
BitsPerPixel = 8
PixelType = 1
Dataset name = /Users/stutz/Documents/Projects/Dale/June_7d_10_23_C_Pastes/MA3-174_LS_10C/LS10_S.jpg
Image 0 Information
Dimension order = X,Y,Channel
Dimension lengths = 512,384,3
--- Global Metadata ---
--- Image Metadata ---

------------------------------------------------------
ImageJ 2.0.0-rc-29-SNAPSHOT/1.50i; Java 1.6.0_65 [64-bit]; Mac OS X 10.9.5; 157MB of 12263MB (1%)

Title: LS10_S.jpg
Width:  512 pixels
Height:  384 pixels
Depth:  1 pixels
Size:  576K
Voxel size: 1x1x1 pixel^3
ID: -96
Bits per pixel: 8 (color LUT)
Display ranges
 1: 0-255
 2: 0-255
 3: 0-255
Image: 1/3
 Channels: 3
 Composite mode: "composite"
No threshold
Uncalibrated
Path: /Users/stutz/Documents/Projects/Dale/June_7d_10_23_C_Pastes/MA3-174_LS_10C/LS10_S.jpg
Screen location: 84,172 (2560x1440)
SetMenuBarCount: 157
Coordinate origin:  0,0,0
No overlay
No selection




Paul

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