http://imagej.273.s1.nabble.com/Please-help-me-with-compilating-plugins-in-Eclipse-tp5017486p5017491.html
maybe Fiji does not find javac because it is not added to the PATH. If
you use Windows, you can find an instruction at [1]. If you use another
> Hello Curtis,
>
> Thank you for trying to help me. Actually I have installed/uninstalled the JDK twice, and also downloaded the whole Fiji zip several times and tried to unpack it in several locations. I always got the error message "javac not found" or something like that. Maybe it is just the PC at my work which has problems. But I am more happy using Eclipse which helps me to easy draw GUIs.
>
> The version of ImageJ I am using is the source package I downloaded yesterday, the version is 1.49q. My code is not on Github. I am just making small plugins enabling colleagues to easy mark and measure sites on oral x-rays. But if one of them gets really good maybe i should consider? I am not a real programmer, just a physicist helping on research projects.
> Now I am just happy my "Hello world" plugin compiles and starts :-)
>
> The thing is that I have to kill the javaw process in order to stop the ImageJ from running. From the Windows Task Manager.
>
> Mvh
> Gerald R. Torgersen
>
>
>> -----Original Message-----
>> From: ImageJ Interest Group [mailto:
[hidden email]] On Behalf Of Curtis
>> Rueden
>> Sent: Wednesday, October 26, 2016 7:13 PM
>> To:
[hidden email]
>> Subject: Re: Please help me with compilating plugins in Eclipse
>>
>> Hi Gerald,
>>
>>> I did it!!!!! After all the years first time it worked!!
>>
>> Congratulations!
>>
>>> Since Fiji removed the tools.jar I cannot compile from the editor
>>> anymore.
>>
>> We removed tools.jar (and javac.jar) specifically so that compilation from the
>> Script Editor _would_ work for the Java-8 version of Fiji, which is the current
>> version you get when you download from
http://fiji.sc/#download.
>> Did you test with a fresh download? It should work out of the box, as long as you
>> have a JDK installed on your system.
>>
>>> Exception in thread "Quit" java.lang.NullPointerException
>>> at ij.WindowManager.getIDList(WindowManager.java:147)
>>> at ij.ImageJ.run(ImageJ.java:745)
>>> at java.lang.Thread.run(Thread.java:745)
>>
>> Which version of ImageJ 1.x are you using? Is your code on GitHub?
>>
>> Regards,
>> Curtis
>>
>> --
>> Curtis Rueden
>> LOCI software architect -
http://loci.wisc.edu/software>> ImageJ2 lead, Fiji maintainer -
http://imagej.net/User:Rueden Did you know
>> ImageJ has a forum?
http://forum.imagej.net/>>
>>
>> On Wed, Oct 26, 2016 at 9:44 AM, Gerald Ruiner Torgersen <
>>
[hidden email]> wrote:
>>
>>> I did it!!!!! After all the years first time it worked!! I only had to
>>> use the minimal project (
https://github.com/imagej/min>>> imal-ij1-plugin/zipball/master). I did not read down there because I
>>> thought the error was earlier in the process. I now used ImageJ and
>>> not Fiji source.
>>> There is still a tiny problem: The ImageJ does not close, I get an:
>>> Exception in thread "Quit" java.lang.NullPointerException
>>> at ij.WindowManager.getIDList(WindowManager.java:147)
>>> at ij.ImageJ.run(ImageJ.java:745)
>>> at java.lang.Thread.run(Thread.java:745)
>>>
>>> Any advice here? Besides that I am happy, i don't know how many hours
>>> I have tried ....
>>>
>>> Mvh
>>> Gerald R. Torgersen
>>>
>>>
>>>> -----Original Message-----
>>>> From: ImageJ Interest Group [mailto:
[hidden email]] On Behalf Of
>>>> Gerald Ruiner Torgersen
>>>> Sent: Wednesday, October 26, 2016 2:17 PM
>>>> To:
[hidden email]
>>>> Subject: Please help me with compilating plugins in Eclipse
>>>>
>>>> Hello everybody,
>>>>
>>>> Since Fiji removed the tools.jar I cannot compile from the editor
>>> anymore. So
>>>> now I am (again) trying to use the Eclipse, JDK combo.
>>>> I have managed to import the Fiji source as maven project and run it
>>>> from
>>> Eclipse.
>>>> I followed the instructions from:
>>>>
http://imagej.net/Developing_ImageJ_in_Eclipse. I am now trying to
>>>> make a PluginFrame plugin.
>>>>
>>>> This is what I have done:
>>>> - created new source folder with the name:
>>>> MandibularAssymetryMeasure_
>>>> - inside that catalog I made two class files:
>>>> Main Plugin class:
>>>> import ij.*;
>>>> import ij.plugin.frame.*;
>>>>
>>>> public class MandibularAssymetryMeasure_ extends PlugInFrame {
>>>>
>>>> private static final long serialVersionUID =
>>>> 4723432002956229961L;
>>>>
>>>> public MandibularAssymetryMeasure_() {
>>>> super("MandibularAssymetryMeasure_");
>>>> }
>>>>
>>>> public void run(String arg) {
>>>> IJ.log("Hello World!");
>>>> }
>>>>
>>>> }
>>>> Launcher:
>>>> import fiji.Debug;
>>>>
>>>> public class Tester {
>>>>
>>>> public static void main(String[] args) {
>>>> Debug.run("MandibularAssymetryMeasure_", null);
>>>> }
>>>>
>>>> }
>>>>
>>>> They both reside in the fiji-master folder. And I created the file
>>> plugins.config in
>>>> the fiji-master\resources folder:
>>>> # Name: MandibularAssymetryMeasure_
>>>> # Author: Gerald Torgersen
>>>> # Version: 0.1
>>>> # Date: 2016/10/xx
>>>> # Requires: ImageJ 1.51f
>>>>
>>>> Plugins>MandibularAssymetryMeasure_, "Run
>>>> Plugins>MandibularAssymetryMeasure_",
>>>> Plugins>MandibularAssymetryMeasure_("run")
>>>>
>>>> I run the the Tester class as a Java application and it starts Fiji,
>>>> but
>>> I get an error
>>>> message: Unrecognized command: "MandibularAssymetryMeasure_"
>>>>
>>>> I have not made a special pom-file for that plugin. I do not know
>>>> how, or
>>> where
>>>> to put it. Please help me somebody. The Norwegian dental health
>>>> depends
>>> on my
>>>> ImageJ programming ;-)
>>>>
>>>> Mvh
>>>> Gerald R. Torgersen
>>>> IT-seksjonen,
>>>> Det odontologiske fakultet, Universitetet i Oslo Faculty of Dentistry
>>> Universitetet i
>>>> Oslo, University of Oslo
>>>>
http://www.odont.uio.no/personer/adm/fak/gerald>>>>
>>>> --
>>>> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>>>
>>> --
>>> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>>>
>>
>> --
>> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>
> --
> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>