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Re: 3D Region of Interest

Posted by Thomas Boudier-4 on Nov 29, 2016; 11:15am
URL: http://imagej.273.s1.nabble.com/3D-Region-of-Interest-tp5017648p5017649.html

Hi XS,

Are you referring to the Ripley's K function ?

http://icy.bioimageanalysis.org/plugin/Spatial_Analysis

Best,

Thomas



On 29/11/2016 18:45, BirthingXS wrote:

> Hi all,
>
> I'm trying to do some 3D clustering analysis described below, and was
> wondering if anyone has ideas how it can be done:
>
> 1. Counting 3D clusters in an image using '3D Object Counter'.
> 2. Import the results into 3D Roi Manager, selecting all the objects which
> places a Roi around each cluster.
> 3. The Roi is then enlarged by a set number of pixels to incorporate some of
> the neighboring clusters as a single cluster.
> 4. The question is: Is there a way to see which of the original clusters
> have been included in to the new clusters?
>
> Thanks in advance.
>
> XS
>
>
>
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   /***************************************************************/
      Thomas Boudier, Associate Professor, UPMC,
      Université Pierre et Marie Curie, Paris, France.
      BII (BioInformatics Institute)/UMI 2955 IPAL, Singapore.
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