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Posted by jumpfunky on Nov 30, 2016; 2:34pm
URL: http://imagej.273.s1.nabble.com/question-on-stack-histogram-macro-tp5017654p5017658.html

Dear List,

I've would like to save some settings of an imagej macro until ImageJ
is restarted.

To be more precise:

I want to apply a macro and safe the settings. If the macro is applied
again then it uses the saved settings. When ImageJ is restarted the
saved settings should be dismissed.

Any ideas?

Best,
Thorsten
Am Mittwoch, den 30.11.2016, 14:11 +0000 schrieb Ding, Lai:

> Thanks for everyone's input.
>
> The getHistogram() can only get info from a single slice. For the
> stack image, I realize the sample code of "StackHistogramLister" can
> be modified for my purpose.
>
> https://imagej.nih.gov/ij/macros/StackHistogramLister.txt
>
> However, I feel since the run("Histogram", "stack") already have the
> histogram of the whole stack, there may be a simple way to retrieve
> the information rather than redo the whole thing through macro codes.
>
> Best
> Lai
>
> -----Original Message-----
> From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of
> Cammer, Michael
> Sent: Tuesday, November 29, 2016 9:40 PM
> To: [hidden email]
> Subject: Re: question on stack histogram macro
>
> Look at the getHistogram command at https://imagej.nih.gov/ij/develop
> er/macro/functions.html#G .
>
> Instead of run("Histogram", "stack"); use the getHistogram command.
>
> _________________________________________
> Michael Cammer, Optical Microscopy Specialist http://ocs.med.nyu.edu/
> microscopy http://microscopynotes.com/
> Cell: (914) 309-3270
>
> ________________________________________
> From: ImageJ Interest Group [[hidden email]] on behalf of Lai
> Ding [[hidden email]]
> Sent: Tuesday, November 29, 2016 9:32 PM
> To: [hidden email]
> Subject: question on stack histogram macro
>
> Hello There,
>
>  I have a simple question on acquiring stack histogram.
>
>  If I have a stack image named "raw", I can  use "Analyze" -->
> "Histogram" to get the stack histogram. the ImageJ will show the
> histogram in a new window named "Histogram of raw".  once I click the
> "List" button in the new window, it will show all the bins and counts
> in a table, then I can save teh table as a xls file.
>
>  My question is how to achieve this in macro language.  once I run
>
>  selectImage("raw");
>  run("Histogram", "stack");
>
>  how do I open the stack histogram table ( as manully click the
> "List" button)?
>
> Thanks
> Lai
>
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