Multi Measure: display slice time

Posted by Fco. Javier Diez Guerra on Dec 26, 2016; 3:30pm
URL: http://imagej.273.s1.nabble.com/Multi-Measure-display-slice-time-tp5017814.html

Hello,

For FRAP time-lapsed stacks, I am using ROI Manager/Multi Measure and
then export data to .csv files. For analysis outside Fiji/ImageJ, I want
to include a time reference of each slice in the first column of the
Results file, but I do not know how to do that.

Since labels can be displayed in the Results window, I assigned a
time-stamp label to individual slices using this simple macro:

timestamp=0.0000
setSlice(1);
for (i=1; i<=nSlices; i++) {
     setMetadata("Label",timestamp);
     timestamp=timestamp+0.1667;
     run("Next Slice [>]");
        }

After running the macro, I can see the added label next to the slice
position in the image stack window. However ROI Manager/Multi Measure
sheets only display the title of the stack under the column tagged
"Label", which is obviously the same for all the slices.

I would appreciate any help.

Best


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Fco. Javier Díez Guerra, PhD
Profesor Titular
Centro de Biología Molecular Severo Ochoa
C/ Nicolás Cabrera, 1
Universidad Autónoma
Ctra Colmenar Viejo Km 15
Cantoblanco, 28049 Madrid
SPAIN

phone:  [phone]
e-mail: [hidden email]

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