http://imagej.273.s1.nabble.com/Multi-Measure-display-slice-time-tp5017814p5017821.html
(SliceTime, and Bleach, Reference and Bkg intensities). So, no matter
> Hi Javier,
>
> if I understand it correctly, you want to rename the headings of the
> Results Table? I fear that this is not possible via the macro language.
> It would be doable in javaScript:
>
> rt=ResultsTable.getResultsTable();
> rt.setHeading(1, "Bleach");
> rt.show("Results");
>
>
> What you could do in the Macro Language is creating your own macro to
> save the Results Table, e.g. using File.saveString(string, path).
> You could first write the headings of your choice to the String, '\n',
> and then read the Results Table line by line, and add its elements to
> the String, with tabs ('\t') and linefeeds ('\n').
> Not very elegant, however.
>
> Michael
> ________________________________________________________________
> On 12/26/2016 08:39 PM, Fco. Javier Díez Guerra wrote:
>> Hi Michael,
>>
>> Thanks for your quick and well-targeted reply. My goal is to automate as
>> much as possible the data extraction process, which is done using Fiji,
>> along with the data analysis of FRAP experiments, which is done using
>> EasyFRAP/Matlab. This app is very appropriate for our FRAP analysis, but
>> sometimes very sensitive to data input formats.
>>
>> I can still streamline and speed up the whole process using your
>> suggestion of appending SliceTime as the last column of the Multi
>> Measure Results array. I would need though to specify the identity of
>> each column (Bleach, Reference, Background ROIs, and Time) when feeding
>> the data into EasyFRAP.
>>
>> Thanks again.
>>
>> Javier
>>
>>
>> El 26/12/2016 a las 19:46, Michael Schmid escribió:
>>> Hi Javier,
>>>
>>> assuming that you refer to the ROI Manager's Multi Measure:
>>> If you do NOT enable 'One row per slice', you can enable 'Display
>>> Label' in Analyze>Set Measurements.
>>> Then you will get a label in the form:
>>> ImageName:RoiName:SliceLabel
>>> In your case, the SliceLabel would be the time.
>>>
>>> If you DO use the 'One row per slice' output, I fear that you can't
>>> have it with the current version of ImageJ:
>>> RoiManager.multiMeasure(ImagePlus, Roi[], boolean) writes only the
>>> image title, not the slice label.
>>>
>>> What you could do is adding a column by a macro after running 'Multi
>>> Measure'. It will be the last, not the first column, however.
>>>
>>> if (nResults() != nSlices())
>>> exit("Error: not one Results row per stack slice");
>>> timestamp = 0;
>>> for (i=0; i<nSlices; i++) {
>>> setResult("SliceTime", i, timestamp);
>>> timestamp=timestamp+0.1667;
>>> }
>>>
>>> Note that Results Table rows are numbered from 0 to nResults-1 (in
>>> contrast to stack slices, which are numbered 1 to nSlices).
>>>
>>> Michael
>>> ________________________________________________________________
>>>
>>>
>>> On 2016-12-26 16:30, Fco. Javier Díez Guerra wrote:
>>>> Hello,
>>>>
>>>> For FRAP time-lapsed stacks, I am using ROI Manager/Multi Measure and
>>>> then export data to .csv files. For analysis outside Fiji/ImageJ, I
>>>> want to include a time reference of each slice in the first column of
>>>> the Results file, but I do not know how to do that.
>>>>
>>>> Since labels can be displayed in the Results window, I assigned a
>>>> time-stamp label to individual slices using this simple macro:
>>>>
>>>> timestamp=0.0000
>>>> setSlice(1);
>>>> for (i=1; i<=nSlices; i++) {
>>>> setMetadata("Label",timestamp);
>>>> timestamp=timestamp+0.1667;
>>>> run("Next Slice [>]");
>>>> }
>>>>
>>>> After running the macro, I can see the added label next to the slice
>>>> position in the image stack window. However ROI Manager/Multi Measure
>>>> sheets only display the title of the stack under the column tagged
>>>> "Label", which is obviously the same for all the slices.
>>>>
>>>> I would appreciate any help.
>>>>
>>>> Best
>>>>
>>>>
>>>> --
>>>>
>>>> Fco. Javier Díez Guerra, PhD
>>>> Profesor Titular
>>>> Centro de Biología Molecular Severo Ochoa
>>>> C/ Nicolás Cabrera, 1
>>>> Universidad Autónoma
>>>> Ctra Colmenar Viejo Km 15
>>>> Cantoblanco, 28049 Madrid
>>>> SPAIN
>>>>
>>>> phone: +34 91 196 4612
>>>> e-mail:
[hidden email]
>>>>
>>>> --
>>>> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>>>
>>> --
>>> ImageJ mailing list:
http://imagej.nih.gov/ij/list.html>>
>
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