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Re: Fluorescence intensity in vesicle and cortex of the cell.

Posted by ctrueden on Jan 17, 2017; 3:11pm
URL: http://imagej.273.s1.nabble.com/Fluorescence-intensity-in-vesicle-and-cortex-of-the-cell-tp5017902p5017910.html

Hi Patrizia,

> I tried to install this plugin but my Fiji has no protocol db.xml.gz.

As stated on the QuimP installation page [1], your "Manage update sites"
screen should have an entry like this:




Regards,
Curtis

[1]
http://www2.warwick.ac.uk/fac/sci/dcs/people/till_bretschneider/quimp/wiki-pages/installation/

P.S. to Till: Cool software. I encourage you to create some content on the
ImageJ wiki about it (e.g. https://imagej.net/QuimP) and add your update
site to the official list of update sites. It would alleviate problems like
this, and make your software accessible. See also
http://imagej.net/Distribution

--
Curtis Rueden
LOCI software architect - http://loci.wisc.edu/software
ImageJ2 lead, Fiji maintainer - http://imagej.net/User:Rueden
Did you know ImageJ has a forum? http://forum.imagej.net/


On Tue, Jan 17, 2017 at 7:35 AM, Casalini Patrizia <
[hidden email]> wrote:

> Dear Till,
>
> I tried to install this plugin but my Fiji has no protocol db.xml.gz.
>
> Best wishes,
>
> Patrizia
>
> -----Messaggio originale-----
> Da: ImageJ Interest Group [mailto:[hidden email]] Per conto di Till
> Bretschneider
> Inviato: martedì 17 gennaio 2017 11:22
> A: [hidden email]
> Oggetto: Re: Fluorescence intensity in vesicle and cortex of the cell.
>
> Dear Pablo,
>
> for quantifying the cortical intensity you might want to try our QuimP
> software.
> The latest version is available here:
> http://www2.warwick.ac.uk/fac/sci/dcs/people/till_bretschneider/quimp/
>
> It is a major revision so please let us know if you encounter any problems.
> I will announce it more widely on the ImageJ user list once we have enough
> feedback from users of the new version.
>
> The new version includes a random segmentation method which is semi
> supervised. It might help with segmenting the vesicles.
>
> Best wishes,
>
> Till
>
> --
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