Posted by
Sho Fujisawa on
Jan 17, 2017; 8:09pm
URL: http://imagej.273.s1.nabble.com/Re-ImageJ-Forum-Image-Analysis-TrackMate-Getting-data-from-non-tracking-channel-tp5017912.html
Praveen -
I just tried that, and I get an error message saying..
Problem reading the settings:
Cannot read image file: C:\Users\sho\Desktop\Total.
The source image is not loaded; cannot instantiates spot analyzers.
I've opend the .xml file, and it does have lines about analyzing a specific image. I've tried changing it to the channel I want to analyze, but it still gives me the same error.
Sho Fujisawa
Sr. Digital Microscopist
Molecular Cytology Core Facility
Memorial Sloan-Kettering Cancer Center
417 E. 68th St.
Zuckerman Room 1834
New York NY 10065
(212) 639-6667
(646) 888-2186
From: Praveen Krishnamoorthy [mailto:
[hidden email]]
Sent: Thursday, January 12, 2017 10:00 AM
To: Fujisawa, Sho/Sloan Kettering Institute
Subject: [ImageJ Forum] [Image Analysis] TrackMate - Getting data from non-tracking channel
[
http://forum.imagej.net/user_avatar/forum.imagej.net/praveen/45/1069_1.png]
Praveen<
http://forum.imagej.net/users/praveen>
January 12
Hello there,
I did something similar in the past and here is what i did. After the trackmate analysis of my first channel and you have an option in Trackmate to save everything as .xml file. Then I closed trackmate, opened my second channel and reloaded the xml file ( Plugins>> Tracking>>Load Trackmate file) from the first channel and ran the analysis again. Then the same settings i used for the first channel is then used for analyzing the tracks from the second channel.
Hope this helps,
Praveen
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