difficulty with bUnwapj transfomations in macros

Posted by Jirka on
URL: http://imagej.273.s1.nabble.com/difficulty-with-bUnwapj-transfomations-in-macros-tp5017916.html

Hello all,
may I have question about the bUnwarpJ plugin. I already searched over
Internet, but not succeed much. I have a case - register two images
together, then warp the source image to target image and in the end
generate the raw transformation to be able show some important points in
the warped image according their positions in source image. (In this moment
I don't race much about quality of the registration.) This perfectly works
when both image are the same size but in following case the source image is
smaller then the target one. Would you have an advice where am I making
mistake?

In attachment are two images to be registered together with two list of
related points. there is the macro I used for registration, warping image
and converting raw transformation and also there is a script that parse the
raw transform (as I understood it displacement field for X and Y
coordinate) and show the points in image for input source image and warped
image.

Thanks
--
Best regards, Jiri Borovec
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Ing. Jiri Borovec, MSc  <[hidden email]>
PhD student at CMP CTU, http://cmp.felk.cvut.cz/~borovji3

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