Posted by
Aryeh Weiss on
Mar 15, 2017; 3:36pm
URL: http://imagej.273.s1.nabble.com/where-is-the-ROI-Picker-tp5018252p5018311.html
Hi Curtis
Thanks for your reply.
On 14/03/2017 20:50, Curtis Rueden wrote:
> Hi Aryeh,
>
> > The problem is that I have to compile it every time I start Fiji.
>
> You can activate the tool manually using the following Groovy script:
>
> ij.IJ.runPlugIn(tools.RoiPicker.class.getName(), "")
>
> I tried doing this, and then playing around on Blobs after analyzing
> particles, but I was unable to make the tool do anything.
>
The strange thing is that when I compiled and ran the source from
github. it actually functioned.
However, now I cannot repeat that. Instead, when I compile i, it does
nothing (other than install the tool), just like when run the groovy script.
Best regards,
--aryeh
> I know I have seen it working when activated by the Stitching plugin.
> So I'm not sure what's different here.
>
> Suggestions welcome on how to better package this with Fiji. But I
> have zero time to mess around with it on my own right now...
>
> Regards,
> Curtis
>
> --
> Curtis Rueden
> LOCI software architect -
https://loci.wisc.edu/software> ImageJ2 lead, Fiji maintainer -
https://imagej.net/User:Rueden
> <
https://imagej.net/User:Rueden>
> Did you know ImageJ has a forum?
http://forum.imagej.net/>
>
> On Thu, Mar 9, 2017 at 7:24 AM, Aryeh Weiss <
[hidden email]
> <mailto:
[hidden email]>> wrote:
>
> On 09/03/2017 12:18, Aryeh Weiss wrote:
>
>
> I cannot find the ROI Picker (
https://imagej.net/ROI_Picker )
> in my Fiji.
>
> I know it is there because the Grid/Collection stitching
> plugin uses it.
>
> I took the source on github
>
https://github.com/fiji/Stitching/blob/master/src/main/java/tools/RoiPicker.java> <
https://github.com/fiji/Stitching/blob/master/src/main/java/tools/RoiPicker.java>
> put it in the macros/tools directory, and compiled it.
> Sure enough, I have the tool. (Interesting --no class file is
> created in that directory. Why?)
>
> The problem is that I have to compile it every time I start Fiji.
>
> So what is the correct way to do this?
>
> --aryeh
>
>
> I am interested in using it without first stitching
> something,an dit must be there, but my Find command utility
> doe snot find it, and I do not see it in the list of tools.
>
> I must be missing something obvious. Can someone tell me where
> to find it and how to put it into the toolbar?
>
> Thanks in advance.
>
> --aryeh
>
> --
>
--
Aryeh Weiss
Faculty of Engineering
Bar Ilan University
Ramat Gan 52900 Israel
Ph: 972-3-5317638
FAX: 972-3-7384051
--
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