Re: iterating over slices in volume?

Posted by ctrueden on
URL: http://imagej.273.s1.nabble.com/iterating-over-slices-in-volume-tp5018309p5018312.html

Hi Kenneth,

> I apologize if this is a repeat - I didn’t see it post and I haven’t
> seen a reply.

You can search the ImageJ list archives by visiting
https://search.imagej.net/, typing the subject of your last post in quotes
(which was "adjust B&C o every slice of a volume"), and then clicking the
big green "ImageJ" button in the "Forum + Lists" section. Then you will see
that your previous mail did indeed post, and you even got a reply from
Michael Schmid:

http://imagej.1557.x6.nabble.com/adjust-B-amp-C-o-every-slice-of-a-volume-tt5018289.html#a5018300

Regards,
Curtis


--
Curtis Rueden
LOCI software architect - https://loci.wisc.edu/software
ImageJ2 lead, Fiji maintainer - https://imagej.net/User:Rueden
Did you know ImageJ has a forum? http://forum.imagej.net/


On Wed, Mar 15, 2017 at 10:14 AM, Kenneth Sloan <[hidden email]>
wrote:

> I apologize if this is a repeat - I didn’t see it post and I haven’t seen
> a reply.  I think this is easy.
>
> I need to iterate a process over all slices of a volume (the current
> candidate is to adjust Brightness&Contrast.  Can someone please provide a
> pointer on how to do this?
>
> In processing these volumes, I first handle individual slices as
> individual images - but they are then aligned and cropped and assembled
> into a volume.  The cropping changes enough things so that another pass of
> adjusting brightness & contrast is called for.  I’d like to avoid unpacking
> the volume into a collection of separate files, using Batch Processor to
> adjust them, and then re-assemble.  Is there a way to iterate through the
> slices “in place”?
>
> —
> Kenneth Sloan
> [hidden email]
>
>
>
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html
>

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