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Re: Help Merge images

Posted by Eric Denarier on Apr 12, 2017; 3:03pm
URL: http://imagej.273.s1.nabble.com/Help-Merge-images-tp5018520p5018526.html

Ah ben désolé.

En tout ca le [i] manque.

Je vais essayé ta macro


Eric Denarier
Grenoble Institut des Neurosciences
Inserm U1216
Chemin Fortuné Ferrini
38700 La Tronche
France

Tél :33 (0)4 565 205 38

http://neurosciences.ujf-grenoble.fr/

Le 12/04/2017 à 15:22, Patricia OBEID a écrit :

> Hello everyone
> I have a problem with a script that worked. Today, I can not make a superimposition of images and I do not understand where the problem is ...
> Any help will be welcome. (I don't know how attach images to my message. The previous mail with images was rejected ...)
> Thank you
> Patricia
>
> The script is :
>     dir = getDirectory("Choose a Directory ");
>     dir2 = getDirectory("Choose Destination Directory ");
>
>        list = getFileList(dir);
>        setBatchMode(true);
>        for (i=0; i<list.length; i++) {
> if (endsWith(list[i], "d1.C01")){
>
> //Ouvre le fichier CTOr
> path = dir+list[i];
> //run("Bio-Formats Windowless Importer","open=[path] open_files");
> open(path);
> setMinAndMax(800, 20000);
>
> //Ouvre le CE
> pathF = replace(path, "d1.C01", "d0.C01");
> fileF = replace(list[i], "d1.C01", "d0.C01");
> open(pathF);
> setMinAndMax(1000, 1800);
>
> channels = "green = ["+list[i]+"] red = ["+fileF+"] ";
> run("Merge Channels...", channels);
>
> pathRGB = dir2 + replace(list[i], "d1.C01", "RGB.TIF");
> saveAs("Tiff", pathRGB);
> }
>        }
>
> print("C'est fini");
>
> --
> ImageJ mailing list: http://imagej.nih.gov/ij/list.html

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