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Correction: Re: Stack control for turning individual slices on and off?

Posted by Christian Goosmann-2 on Jun 29, 2017; 11:34am
URL: http://imagej.273.s1.nabble.com/Stack-control-for-turning-individual-slices-on-and-off-tp5018996p5018998.html

Sorry, Ctl+Shift "Z" opens the channels tool of course.
C.

---
Christian Goosmann
Mikroskopie
Max-Planck-Institut für Infektionsbiologie
Campus Charité Mitte
Charitéplatz 1
10117 Berlin
Tel.: +49 30 28460 388

Christian Goosmann wrote:

> Hi Andy
> it sounds like you want to load your multiband image as a composite
> stack in Fiji. If it doesn't automatically import as composite stack,
> you have to import the single band (or channel) images as a simple
> stack and use the 'Image>Hyperstacks>Stack to Hyperstack...' command.
> You end up with a window with a slider to go through the channels.
> Open the 'channels tool' by hitting ctl+alt "z". Then you can set the
> upper dropdown item in the tool to 'Composite' view. This shows you an
> overlay of the channels and you can uncheck the ones you don't want to
> include. You can pick different color luts for the individual
> channels, the hyperstack is colorcoded in a default manner at the
> beginning.
> Hth
> Christian
>
> ---
> Christian Goosmann
> Mikroskopie
> Max-Planck-Institut für Infektionsbiologie
> Campus Charité Mitte
> Charitéplatz 1
> 10117 Berlin
> Tel.: +49 30 28460 388
>
> Andy Schofield wrote:
>> Hi All,
>>
>> I have a multiband, 16-bit per band satellite Tiff image and wondered
>> if there are any tools/plugins available in Fiji that enables easy
>> control over switching slices on and off so I can assess the
>> alignment between the different bands (such as the layer control tool
>> in Photoshop etc. for instance)?
>>
>> Regards
>> Andy
>>
>> BTW, in s similar vein, is there a tool/plugin that can manage the
>> selective manual reordering of slices in a stack? I looked at the
>> Image->Stacks->Tools->Stack Sorter but this seemed to be
>> add/remove/duplicate or reverse/order by label only. I ended up
>> renaming each slice to use th reorder by label but wondered if there
>> was plugin that allows the idea of 'Move current slice to slice 6'
>> for instance?
>>
>>
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