Re: how to apply theshholds ot image

Posted by Aryeh Weiss on
URL: http://imagej.273.s1.nabble.com/how-to-apply-theshholds-ot-image-tp5019448p5019459.html

Thank you for your reply.
My problem was not how to set the thresholds, for which I used the
setThreshold method in ImageProcessor.
However, I mistakenly thought that "Convert to Mask" was not using those
thresholds -- turns out I was wrong bout that.

I still wonder if there is a way to apply the thresholds without using
the global IJ.run to run the "Convert to Mask" command. Something like
ImageProcessor.applyThresholds() .

--aryeh

On 28/09/2017 15:25, MChapman wrote:

> Aryeh,
>
> I think I ran into the same issue as you (wanting to use my own thresholding
> values instead of the automatic thresholds).
>
> While using the macro recorder, in the threshold menu, click on "set" and
> specify you values.  This will expose another function in the recorder that
> will let you set the values in the script.
>
> Mike
>
>
>

--
Aryeh Weiss
Faculty of Engineering
Bar Ilan University
Ramat Gan 52900 Israel

Ph:  972-3-5317638
FAX: [phone]

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